a method of linkage analysis using an examination of the common logarithm of the ratio of the likelihood for a particular value of the recombination fraction to that if the recombination fraction is 0.5 (i.e., no linkage); thus, a lod score of 3 at a recombination fraction of 0.2 means that the data are 1000 times more readily explained by supposing a recombination fraction of 0.2 than by supposing the loci are unlinked and the recombination fraction is 0.5. [logarithm of the odds]
